FlexPoint Virtual School is part of the Cognia accreditation umbrella held by Florida Virtual School. Cognia encompasses three accrediting bodies:
- The Southern Association of Colleges and Schools Commission on Accreditation and School Improvement (SACS CASI)
- The North Central Association of Colleges and School Commission on Accreditation and School Improvement (NCA)
- The Northwest Accreditation Commission (NWAC)
FlexPoint Virtual School is accredited by the Accrediting Commission for Schools Western Association of Schools and Colleges (ACS WASC), and Supplementary Education Program/Online Course Publisher with Instructors by WASC.